Cream Cheese Everything Bagel Muffins

Featured in: Classic American Desserts

These fluffy muffins blend classic everything bagel flavors with a creamy cheese center, making them perfect for breakfast or brunch. Each bite offers a savory mix of warm dough, tangy cream cheese, and a crisp topping of sesame seeds and bagel seasoning. Easy to prepare, they feature buttermilk for richness and honey for a subtle sweetness. Enjoy them fresh from the oven, with optional chives for added zest and serve them warm or at room temperature. Pair with smoked salmon and herbs for a delightful brunch platter.

Updated on Wed, 29 Oct 2025 15:05:00 GMT
Fluffy cream cheese everything bagel muffins topped with savory seasoning and sesame seeds.  Save
Fluffy cream cheese everything bagel muffins topped with savory seasoning and sesame seeds. | epicurestates.com

Fluffy, savory muffins packed with classic everything bagel flavors and a creamy cheese center—perfect for breakfast or brunch.

I first created these muffins for a weekend brunch and they quickly became a favorite. The cheesy center surprises everyone and the everything bagel topping adds flavor in every bite.

Ingredients

  • All-purpose flour: 2 cups (250 g)
  • Baking powder: 2 tsp
  • Baking soda: 1/2 tsp
  • Salt: 1/2 tsp
  • Eggs: 2 large
  • Buttermilk: 3/4 cup (180 ml)
  • Vegetable oil: 1/4 cup (60 ml)
  • Unsalted butter: 2 tbsp, melted
  • Honey: 1 tbsp
  • Cream cheese: 8 oz (225 g), softened
  • Fresh chives: 1 tbsp, chopped (optional)
  • Garlic powder: 1/4 tsp
  • Everything bagel seasoning: 2 tbsp
  • Sesame seeds: 1 tbsp (optional for extra crunch)

Instructions

Prep Muffin Tin:
Preheat oven to 375°F (190°C). Line a 12-cup muffin tin with paper liners or lightly grease with nonstick spray.
Mix Dry Ingredients:
In a medium bowl, whisk together flour, baking powder, baking soda, and salt.
Combine Wet Ingredients:
In a large bowl, beat eggs, buttermilk, vegetable oil, melted butter, and honey until combined.
Mix Batter:
Add dry ingredients to wet ingredients and stir until just combined. Do not overmix.
Prepare Cheese Filling:
In a small bowl, mix softened cream cheese with chives (if using) and garlic powder until smooth.
Assemble Muffins:
Fill each muffin cup halfway with batter. Place about 1 tablespoon of cream cheese mixture in the center of each, then cover with remaining batter.
Add Topping:
Sprinkle tops with everything bagel seasoning and sesame seeds.
Bake:
Bake for 20–22 minutes, or until tops are golden and a toothpick inserted into the muffin part comes out clean.
Cool:
Cool in pan for 5 minutes, then transfer to a wire rack to cool slightly. Enjoy warm or at room temperature.
Warm, golden muffins with a creamy cheese center, perfect for breakfast or brunch.  Save
Warm, golden muffins with a creamy cheese center, perfect for breakfast or brunch. | epicurestates.com

My kids love helping sprinkle the seasoning on each muffin and always ask for seconds. These muffins are now a staple for weekend breakfast in our home.

Required Tools

12-cup muffin tin, mixing bowls, electric mixer or whisk, measuring cups and spoons, rubber spatula

Allergen Information

Contains wheat (gluten), eggs, milk (dairy), sesame seeds in topping. Always check bagel seasoning for other allergens.

Nutritional Information

Each muffin contains approximately 210 calories, 12 g fat, 21 g carbohydrates, and 5 g protein.

Deliciously soft everything bagel muffins filled with rich cream cheese and fresh chives. Save
Deliciously soft everything bagel muffins filled with rich cream cheese and fresh chives. | epicurestates.com

Try these muffins fresh out of the oven for ultimate creaminess. They’re perfect for pairing with tea or coffee.

Recipe FAQs

How do I achieve a fluffy muffin texture?

Mix wet and dry ingredients just until combined; avoid overmixing to keep the muffins soft and light.

Can I use another cheese instead of cream cheese?

Yes, softened goat cheese or mascarpone works as a substitute for a tangy or mild filling.

What if I don’t have buttermilk?

Greek yogurt or a mixture of milk and vinegar can replace buttermilk with a similar tangy result.

Is everything bagel seasoning necessary?

The seasoning provides classic flavor and crunch, but you can make your own blend with sesame, poppy, garlic, and onion.

How should leftovers be stored?

Keep muffins in an airtight container at room temperature for up to two days, or refrigerate for longer freshness.

Can I make these gluten-free?

Use a suitable gluten-free flour blend for best results; adjust liquids as needed to maintain texture.

Cream Cheese Everything Bagel Muffins

Soft muffins with everything bagel flavor and creamy cheese center—ideal for breakfast or snack.

Prep duration
15 min
Cook duration
22 min
Complete duration
37 min


Complexity Easy

Heritage American

Output 12 Portions

Dietary considerations Meat-free

Components

Dry Ingredients

01 2 cups all-purpose flour
02 2 teaspoons baking powder
03 1/2 teaspoon baking soda
04 1/2 teaspoon salt

Wet Ingredients

01 2 large eggs
02 3/4 cup buttermilk
03 1/4 cup vegetable oil
04 2 tablespoons unsalted butter, melted
05 1 tablespoon honey

Cheese Filling

01 8 ounces cream cheese, softened
02 1 tablespoon chopped fresh chives
03 1/4 teaspoon garlic powder

Topping

01 2 tablespoons everything bagel seasoning
02 1 tablespoon sesame seeds

Directions

Phase 01

Prepare Muffin Tin: Preheat oven to 375°F. Line a 12-cup muffin tin with paper liners or lightly grease with nonstick spray.

Phase 02

Combine Dry Ingredients: In a medium bowl, whisk together all-purpose flour, baking powder, baking soda, and salt until evenly mixed.

Phase 03

Mix Wet Ingredients: In a large bowl, beat eggs, buttermilk, vegetable oil, melted butter, and honey until fully combined.

Phase 04

Integrate Wet and Dry Mixtures: Add dry ingredients to the wet mixture and stir gently until just incorporated. Avoid overmixing to maintain the muffins' delicate texture.

Phase 05

Prepare Cheese Filling: In a small bowl, blend softened cream cheese with fresh chives and garlic powder until smooth and evenly distributed.

Phase 06

Assemble Muffins: Spoon batter into each muffin cup until half full. Place approximately 1 tablespoon cream cheese filling in the center of each cup, then cover with remaining batter.

Phase 07

Top Muffins: Sprinkle everything bagel seasoning and sesame seeds over each muffin for a flavorful finishing touch.

Phase 08

Bake: Bake for 20 to 22 minutes, or until muffins are golden and a toothpick inserted into the batter comes out clean.

Phase 09

Cool and Serve: Allow muffins to cool in the pan for 5 minutes, then transfer to a wire rack to cool slightly. Serve warm or at room temperature.

Necessary tools

  • 12-cup muffin tin
  • Mixing bowls
  • Electric mixer or whisk
  • Measuring cups and spoons
  • Rubber spatula

Allergy details

Review each component for potential allergens and consult with healthcare professionals if you're uncertain.
  • Contains wheat (gluten), eggs, milk (dairy), and sesame seeds.
  • Verify everything bagel seasoning for additional allergens as ingredients may vary.

Nutritional information (each portion)

These values are offered as a general guide and shouldn't replace professional medical guidance.
  • Energy: 210
  • Fat: 12 g
  • Carbohydrates: 21 g
  • Protein: 5 g